Publications


Peer-reviewed Journal Articles

S.-Y. Lu, T. J. Zuehlsdorff, H. Hong, V. P. Aguirre, C. M. Isborn, L. Shi, The Influence of Electronic Polarization on Nonlinear Optical Spectroscopy, J. Phys. Chem. B 125 (44), 12214-12227 (2021)

A. J. Dunnett, D. Gowland, C. M. Isborn, A. W. Chin, T. J. Zuehlsdorff, Influence of non-adiabatic effects on linear absorption spectra in the condensed phase: Methylene blue, J. Chem. Phys. 155, 144112 (2021)

T. J. Zuehlsdorff, S. V. Shedge, S.-Y. Lu, H. Hong, V. P. Aguirre, L. Shi, C. M. Isborn, Vibronic and Environmental Effects in Simulations of Optical Spectroscopy, Annu. Rev. Phys. Chem. 72 (2021)

S. V. Shedge, T. J. Zuehlsdorff, A. Khanna, S. Conley, C. M. Isborn, Explicit environmental and vibronic effects in simulations of optical spectroscopy, J. Chem. Phys. 154, 084116 (2021)

M. S. Chen, T. J. Zuehlsdorff, T. Morawietz, C. M. Isborn, T. E. Markland, Exploiting Machine Learning to Efficiently Predict Multidimensional Optical Spectra in Complex Environments, J. Phys. Chem. Lett. 11 (18), 7559-7568 (2020)

T. J. Zuehlsdorff, H. Hong, L. Shi, C. M. Isborn, Nonlinear spectroscopy in the condensed phase: The role of Duschinsky rotations and third order cumulant contributions, J. Chem. Phys. 153, 044127 (2020)

J. C. A. Prentice, J. Aarons, J. C. Womack, A. E. A. Allen, L. Andrinopoulos, L. Anton, R. A. Bell, A. Bhandari, G. A. Bramley, R. J. Charlton, R. J. Clements, D. J. Cole, G. Constantinescu, F. Corsetti, S. M.-M. Dubois, K. K. B. Duff, J. M. Escartín, A. Greco, Q. Hill, L. P. Lee, E. Linscott, D. D. O’Regan, M. J. S. Phipps, L. E. Ratcliff, Á. R. Serrano, E. W. Tait, G. Teobaldi, V. Vitale, N. Yeung, T. J. Zuehlsdorff, J. Dziedzic, P. D. Haynes, N. D. M. Hine, A. A. Mostofi, M. C. Payne, C.-K. Skylaris, The ONETEP linear-scaling density functional theory program, J. Chem. Phys. ESS2020, 174111 (2020)

T. J. Zuehlsdorff, H. Hong, L. Shi, C. M. Isborn, Influence of Electronic Polarization on the Spectral Density, J. Phys. Chem. B 124 (3), 531-543 (2019)

T. J. Zuehlsdorff, A. Montoya-Castillo, J. A. Napoli, T. E. Markland, and C. M. Isborn, Optical Spectra in the Condensed Phase: Capturing Anharmonic and Vibronic Features Using Dynamic and Static Approaches, J. Chem. Phys. 151, 074111 (2019)

S. V. Shedge, T. J. Zuehlsdorff, M. J. Servis, A. E. Clark, and C. M. Isborn, Effect of Ions on the Optical Absorption Spectra of Aqueously Solvated Chromophores, J. Phys. Chem. A 123 (29), 6175-6184 (2019)

T. J. Zuehlsdorff, C. M. Isborn, Modeling absorption spectra of molecules in solution,  Int. J. Quantum. Chem. 119 (1), e25719 (2019)

T. J. Zuehlsdorff, J. A. Napoli, J. M. Milanese, T. E. Markland, and C. M. Isborn, Unraveling Electronic Absorption Spectra using Nuclear Quantum Effects: Photoactive Yellow Protein and Green Fluorescent Protein Chromophores in Water, J. Chem. Phys. 149, 024107 (2018)

J.-H. Li, T. J. Zuehlsdorff, M. C. Payne, and N. D. M. Hine, Photophysics and Photochemistry of DNA Molecules – Electronic Excited States Leading to Thymine Dimerization, J. Phys. Chem. C 122, 11633 (2018)

R. J. Charlton, R. M. Fogarty, S. Bogatko, T. J. Zuehlsdorff, N. D. M. Hine, M. Heeney, A. P. Horsfield, and P. D. Haynes, Implicit and explicit host effects on excitons in pentacene derivatives, J. Chem. Phys. 148, 104108 (2018)

T. J. Zuehlsdorff, and C. M. Isborn, Combining the Ensemble and Franck-Condon Approaches for Spectral Shapes of Molecules in Solution, J. Chem. Phys. 148, 024110 (2018)

J. Joseph, K. Koehler, T. J. Zuehlsdorff, D. J. Cole, K. N. Baumann, J. Weber, S. E. Bohndiek, and S. Hernandez-Ainsa, Distance dependent photoacoustics revealed through DNA nanostructures, Nanoscale 9, 16193-16199 (2017)

T. J. Zuehlsdorff, P. D. Haynes, M. C. Payne, and N. D. M. Hine, Predicting solvatochromic shifts and colours of a solvated organic dye: The example of nile red, J. Chem. Phys. 146, 124504 (2017) 

T. J. Zuehlsdorff, P. D. Haynes, F. Hanke, M. C. Payne, and N. D. M. Hine, Solvent effects on electronic excitations of an organic chromophore, J. Chem. Theory Comput. 12 (4), 1853-1861 (2016)

T. J. Zuehlsdorff, N. D. M. Hine, M. C. Payne, P. D. Haynes, Linear-scaling time-dependent density-functional theory (TDDFT) beyond the Tamm-Dancoff approximation: obtaining efficiency and accuracy with in situ optimised local orbitals, J. Chem. Phys. 143, 204107 (2015)

J.-H. Li, T. J. Zuehlsdorff, M. C. Payne, and N. D. M. Hine, Identifying and tracing potential energy surfaces of electronic excitations with specific character via their transition origins: application to oxirane, Phys. Chem. Chem. Phys. 17, 12065 (2015)

T. J. Zuehlsdorff, N. D. M. Hine, J. S. Spencer, N. M. Harrison, D. J. Riley, and P. D. Haynes, Linear-scaling time-dependent density-functional theory in the linear-response formalism, J. Chem. Phys. 139, 064104 (2013)


Books

T. J. Zuehlsdorff, Computing the Optical Properties of Large Systems, Springer International Publishing (Switzerland, 2015), ISBN: 978-3-319-19769-2